# Welcome to Bio-OS

## Overview

Bio-OS is an open-source platform for genomics users. It provides a workspace which encapsulates data, workflows, Notebooks, job history, etc. Bio-OS provides both GUI and CLI(Command Line Interface) to quickly setup and run workflows specified by languages like WDL and notebook as well.

Bio-OS是一个面向基因组学用户的开源平台。它提供了一个封装数据、工作流、笔记本、工作历史等的工作空间。Bio-OS提供了GUI和CLI（命令行界面）来快速设置和运行由WDL和笔记本等语言指定的工作流。

### Bio-OS Concept

1. 开放性：通过社区开源和开放API接口构建跨领域、机构和地区的协作和生态
2. 云原生：基于云原生架构，支持Serverless容器的弹性编排和调度能力
3. 可扩展：通过在架构层面的“接口-实现”解耦合，实现不同程度的可扩展，从而让操作系统针对更多场景具有普适性
4. 标准化：符合国际标准的统一数据接口规范、流程语言规范，生信应用可迁移，生信数据可流转

<figure><img src="/files/m9bvyEsAli6L0QOH6yDg" alt=""><figcaption></figcaption></figure>

### Bio-OS Workspace

在Bio-OS生信操作系统中，workspace是对一次生信研究过程的完整封装，包括数据，环境，代码，操作计算过程和结果以及作为整体介绍的dashboard，是实现科学研究和临床应用可执行，可移植，可复现，可分享，可发表的基本单位。

<figure><img src="/files/2G8vp76kPOrNtNOTRcmu" alt=""><figcaption></figcaption></figure>

## Quick links

{% content-ref url="/pages/WimFZjFOWkpRhjub79Iv" %}
[概览](/userguide/gai-lan/shen-me-shi-bioos.md)
{% endcontent-ref %}

{% content-ref url="/pages/ly7VKTfqVrJLYnVYKCz3" %}
[工作空间](/userguide/chan-pin-zhi-nan/gong-zuo-kong-jian.md)
{% endcontent-ref %}

{% content-ref url="/pages/7GFvIYsARFRRUX46TnQG" %}
[命令行工具（bioctl）](/userguide/chan-pin-zhi-nan/ming-ling-xing-gong-ju-bioctl.md)
{% endcontent-ref %}

## Get Started

We've put together some helpful guides for you to get setup with our product quickly and easily.

{% content-ref url="/pages/B23q4naQDjFOnnTEXL4d" %}
[Getting set up](/userguide/bu-shu/getting-set-up.md)
{% endcontent-ref %}

{% content-ref url="/pages/PxzTZbsyXZaeZbScroDv" %}
[部署Bio-OS](/userguide/bu-shu/getting-set-up/bu-shu-bioos.md)
{% endcontent-ref %}


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```
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```

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